MS Tools

H/D Exchange Calculator

Calculates number of exchangeable hydrogens, monoisotopic and average masses and displays a simple peptide statistics (example result)

H/D Experiment Planner

Creates a time schedule for H/D exchange experiments (example result)

Draw Map

Creates a graphical representation of protein sequence coverage (example result)

Draw H/D Heat Map

Draws graphical representation of H/D exchange using color gradients (heat maps) (example result)

Draw H/D Protection Plot

Creates a protection plot based on data from H/D exchange and allows comparison of various conditions (example result)

JMol Scripter

Visualization of H/D data on protein structure using JMol.

Original MSTools could be found at http://ms.biomed.cas.cz/MSTools/ - Europe, The Czech Republic.

If you have any questions, please do not hesitate to contact us at: pman@biomed.cas.cz or kuan@natur.cuni.cz.